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Atlases of animal models of colitis:

Powerpoint on preparing tissue for histology:

Histology Software:

  • Hamamatsu/NDP (matches format for scanned files from microscopy core, good for photos of images
  • Aperio (can be used with NDP files, good for photos of images)
  • QuPath (most powerful, accepts all files, has a steeper learning curve)
  • Zeiss (link to download Zen Blue Free Microscope Software, ZEN lite from Carl Zeiss Microscopy USA)